Frédéric Joliot Institute for Life Sciences - On the same theme https://joliot.cea.fr/drf/joliot/en/Pages/news/Institute/2019/Genopole-structural-biology-platforms-joins-FRISBI.aspx Website of the Frédéric-Joliot Institute of Life Sciences which includes 4 departments: I2BC, DMTS, NeuroSpin and Service hospitalier Frédéric Joliot (SHFJ). The teams are mainly located at the CEA Paris-Saclay center and at the Orsay hospital. en-US https://www.cea.frhttps://www-cea-fr.admsite.extra.cea.fr/Style%20Library/Themes/drf/instituts/images/logo-cea-joliot.png Frédéric Joliot Institute for Life Sciences - On the same theme https://joliot.cea.fr/drf/joliot/en Protein-protein interactions: how to push forward the limits of the revolutionary AlphaFold2 programme? https://www.cea.fr/drf/joliot/en/Pages/news/Science/2024/proteins-proteins-interactions-AlphaFold2.aspx In an article published in Nature Communications, researchers from the I2BC show that applying a fragmentation strategy to the protein partners of assemblies depending on intrinsically disordered regions very significantly improves AlphaFold2's prediction capacity. Structural biology ; Artificial intelligence Researchers SB2SM Scientific result Mon, 29 Jan 2024 11:00:00 GMT Phytic acid: a small molecule that helps repair DNA breaks https://www.cea.fr/drf/joliot/en/Pages/news/Science/2023/phytic-acid-DNA-repair.aspx In an article published in the journal Nucleic Acids Research, scientists from the I2BC, lPBS and the Institute for Structural and Chemical Biology (University of Leicester, UK) demonstrate how phytic acid, a product of cellular metabolism, stabilises the assembly of a complex enabling the repair of DNA breaks in humans. DNA ; Structural biology Researchers SB2SM Scientific result ; Article Mon, 04 Dec 2023 11:00:00 GMT Multiplier les chimères pour mieux comprendre les interactions inhibiteur-cible protéique https://www.cea.fr/drf/joliot/en/Pages/news/Science/2023/Multiplier-chimeres-mieux-comprendre-interactions-inhibiteur-cible-proteique.aspx En substituant des segments d’hélice alpha​ par des segments d’oligo-urées dans un peptide inhibiteur d’ASF1, lui conférant ainsi une résistance accrue aux protéases, des chercheurs de l’I2BC en collaboration avec l’IECB explorent les modes de liaison de ces chimères peptide-urée à leur cible. Molecular mechanisms ; Structural biology Researchers SB2SM Scientific result ; Article Tue, 12 Sep 2023 10:00:00 GMT DNA repair machinery more flexible thanks to PAXX? https://www.cea.fr/drf/joliot/en/Pages/news/Science/2023/Reparation-ADN-PAXX.aspx An international collaboration led by researchers from I2BC/CEA-Joliot and IPBS (Toulouse) has solved the atomic structure of molecular assemblies involved in the repair of DNA double-strand breaks. The diversity of assemblies involving the PAXX protein identified in this study highlights the great flexibility of the repair machinery, which could reflect its ability to adapt to biological conditions. The results were published in Science Advances. Structural biology ; Molecular mechanisms Researchers SB2SM Scientific result cryoEM;radiocristallographie; Tue, 06 Jun 2023 10:00:00 GMT Hepatitis E virus: AlphaFold to the rescue to better understand how this pathogen multiplies its genome https://www.cea.fr/drf/joliot/en/Pages/news/Science/2023/Virus-hepatite-E-AlphaFold.aspx I2BC researchers unveil an atomic model of the hepatitis E virus replication polyprotein obtained with the AlphaFold artificial intelligence program. The model provides a better understanding of how this RNA virus multiplies its genome in infected cells. Structural biology ; Simulation & modelling ; Artificial intelligence Researchers SB2SM Scientific result AlphaFold2;RNA virus;in vitro translation; Wed, 08 Feb 2023 11:00:00 GMT Numerical simulation provides information on the restriction of BAF protein dynamics by phosphorylation https://www.cea.fr/drf/joliot/en/Pages/news/Science/2023/BAF-numerical-simulation-phosphorylation.aspx Using molecular dynamics simulation and NMR studies, I2BC researchers detail the restriction mechanisms of BAF protein dynamics due to its phosphorylation. Molecular mechanisms ; Structural biology ; Simulation & modelling Researchers SB2SM Scientific result Mon, 16 Jan 2023 11:00:00 GMT Towards understanding the mechanisms responsible for intrahepatic cholestasis: biochemical and structural study of the human ATPase ATP8B1 https://www.cea.fr/drf/joliot/en/Pages/news/Science/2022/Intrahepatic-cholestasis-biochemistry-structure-ATP8B1.aspx A collaborative study involving an I2BC team unveils the mechanism of autoinhibition of the human flippase ATP8B1, as well as its regulation by lipids and phosphorylation. The study provides a better understanding of the impact of flippase mutations responsible for intrahepatic cholestasis on its enzymatic activity. Molecular mechanisms ; Structural biology Researchers SB2SM Scientific result ATP;hydrolyse;protéine membranaire;modifications post-traductionnelles;expression hétérologue;membranes;cryo-EM; Thu, 09 Jun 2022 10:00:00 GMT The unveiling of atomic structure of lanreotide nanotubes surprises! https://www.cea.fr/drf/joliot/en/Pages/news/Science/2022/structure-nanotubes-lanreotide.aspx ​Thanks to recent developments in cryo-electron microscopy, a study led by a team from the I2BC reveals, at the atomic scale, the unsuspected structural complexity of lanreotide nanotubes, a drug used in the treatment of acromegaly and some neuro-endocrine cancers. Structural biology Researchers SB2SM Scientific result Thu, 20 Jan 2022 11:00:00 GMT In silico modelling unveils mechanisms of coordination between pairing and crossovers during meiosis https://www.cea.fr/drf/joliot/en/Pages/news/Science/2022/Modeling-pairing-crossover-meiosis.aspx In a study conducted by a team from the Institut Curie, researchers from the CEA-Joliot (B3S/I2BC department) have modeled in silico protein-protein interactions and thus contributed to establish at the molecular level the mechanisms that coordinate the pairing and recombination of homologous chromosomes during meiosis. Simulation & modelling ; Structural biology ; Molecular mechanisms Researchers SB2SM Article ; Scientific result recombinaison homologue;AlphaFold;crossing-over;InterEvDock3; Thu, 13 Jan 2022 11:00:00 GMT The european PPI4HPC project echoes high-performance computing at CEA for the modelisation of complex molecular assemblages https://www.cea.fr/drf/joliot/en/Pages/news/Institute/2021/High-performance-computing-molecular-modelisation.aspx A project at the interface between quantum chemistry and molecular dynamics for the study of complex molecular assemblies, led by Michel Masella (Joliot) and Luigi Genovese (IRIG), makes it possible, for applications in biology/health, to take full advantage of the new supercomputers of the Public Procurement of Innovations for High-Performance Computing (PPI4HPC, H2020) project hosted at the Très Grand Centre de Calcul (TGCC) of the CEA-Bruyères-le-Châtel. Computing ; Simulation & modelling ; Supercomputers ; Structural biology News ; Article Tue, 14 Sep 2021 10:00:00 GMT Structure of the BRCA2-HFS2BP complex: the interaction is not required for Rad51 recruitment to DNA in meiosis https://www.cea.fr/drf/joliot/en/Pages/news/Science/2021/BRCA2-HFS2BP-meiosis.aspx By solving the three-dimensional structure of a fragment of the BRCA2-HSF2BP complex, a collaboration involving teams from I2BC and ERASMUS MC identifies the precise BRCA2 motif that causes the very high affinity between the two partners and shows that, in vivo, this complex has no function in the recruitment of Rad51 to meiotic sites of homologous recombination. Structural biology Researchers SB2SM Article ; Scientific result RMN;radiocristallographie; Mon, 13 Sep 2021 10:00:00 GMT 3rd version of the InterEvDock server: better exploiting protein sequence evolution data to improving the prediction of interface structures https://www.cea.fr/drf/joliot/en/Pages/news/Science/2021/InterEvDock3.aspx Researchers at I2BC/CEA-Joliot, in collaboration with the RPBS platform, have developed the third version of their InterEvDock server for structural modelling of protein-protein interactions. The server integrates new algorithms for exploiting sequence evolution information. Structural biology Researchers SB2SM Scientific result HADDOCK;FRODOCK;coMSAs;CAPRI; Mon, 21 Jun 2021 10:00:00 GMT Molecular basis of the “scissors” mechanism involved in meiotic recombination and DNA repair https://www.cea.fr/drf/joliot/en/Pages/news/Science/2021/Mlh1-Mlh3.aspx Researchers from I2BC/CEA-Joliot in collaboration with teams from Institut Curie and IRCM/CEA-Jacob, lay the molecular basis to explain the dual role of the Mlh1-Mlh3 complex in DNA mismatch repair and, quite uniquely, in one of the key steps of genetic mixing during meiosis. Structural biology Researchers SB2SM Scientific result cristallography;repair;recombination; Mon, 07 Jun 2021 10:00:00 GMT Phosphorylation of BAF alters its dynamics and interaction with DNA but not its contacts with the nuclear envelope https://www.cea.fr/drf/joliot/en/Pages/news/Science/2021/phosphorylation-BAF-interaction.aspx ​A study by researchers from I2BC department shows in vitro the effect of mitotic phosphorylation of the BAF protein on its structure and its interactions with DNA and lamina and unveils consequences on genome organization and on mechanisms responsible for progeroid syndromes. Molecular mechanisms ; DNA ; Structural biology Researchers SB2SM Scientific result NMR;radiocristallography; Mon, 29 Mar 2021 10:00:00 GMT Anti-cancer therapeutic strategy: a chimera to inhibit ASF1 https://www.cea.fr/drf/joliot/en/Pages/news/Science/2021/Foldamer-inhibitor-ASF1.aspx I2BC researchers, in collaboration with the European Institute of Chemistry and Biology (University of Bordeaux, CNRS), have developed a chimeric peptide/foldamer molecule that is resistant to proteolysis and inhibits ASF1, a potential target for anticancer treatment. The resolution of the structure of this chimera in interaction with its target, the first of its kind, reveals an unsuspected plasticity of the urea-based backbone that hugs the surface of ASF1. Structural biology ; Molecular mechanisms ; Epigenetics ; Cancer Researchers SB2SM Scientific result NMR;radiocristallography; Fri, 19 Mar 2021 11:00:00 GMT First functional characterization of ATP2, an essential Plasmodium flippase and potential antimalarial target https://www.cea.fr/drf/joliot/en/Pages/news/Science/2021/Functional-characterization-PcATP2-essential-Plasmodium-flippase.aspx I2BC researchers, in collaboration with the Autonomous University of Barcelona, have provided the first studies of the function and structural organization of a flippase encoded by a parasite responsible for malaria, a first step towards understanding the essential physiological function of this transporter and its potential use as an antimalarial target. Structural biology ; Infectious diseases Scientific result Wed, 17 Mar 2021 11:00:00 GMT Lamins and Progeria: What Does Structural Biology Tell Us? https://www.cea.fr/drf/joliot/en/Pages/news/Institute/2020/Lamines-Progeria-Structural-Biology.aspx A team from the I2BC publishes in FEBS Journal an exhaustive review of the various mutations affecting the structure of type A lamins, proteins that make up the envelope of the cell nucleus (nuclear lamina), which lead to premature aging in people with the disease (Progeria). Structural biology ; Diseases Mon, 24 Aug 2020 10:00:00 GMT Lipid transmembrane transport: very first structures are revealed! https://www.cea.fr/drf/joliot/en/Pages/news/Science/2019/Drs2-Cdc50-CryoEM-Structure-Nature.aspx Researchers from I2BC@Saclay, the University of Aarhus and the Max Planck Institute of Biophysics in Frankfurt reveals the first cryo-EM high-resolution structures of one of the P4-ATPases. Study has been published in Nature. It give a better insight towards the understanding of the transport mechanisms of membrane lipids. A lipid pathway through the protein membrane domain is suggested. Structural biology ; Molecular mechanisms Saclay Press release ; Scientific result lipid asymetry;P4-ATPase;membrane lipid translocation; Thu, 27 Jun 2019 10:00:00 GMT FRISBI: the structural biology platform of Genopole joins the National Infrastructure https://www.cea.fr/drf/joliot/en/Pages/news/Institute/2019/Genopole-structural-biology-platforms-joins-FRISBI.aspx The French National Infrastructure of Integrated Structural Biology (FRISBI) is now integratinf Genopole's structural biology platform into its Paris-Sud node. Structural biology Researchers Saclay Academic partnerships i;microscope à force atomique;plateforme; Fri, 10 May 2019 10:00:00 GMT DNA repair: in-depth look at the initial stages https://www.cea.fr/drf/joliot/en/Pages/news/Science/2018/DNA-repair-zoom-first-steps.aspx A research team from the SB2SM (I2BC@Saclay), in collaboration with the CNRS, SOLEIL , Universities of Paris-Sud, Aix-Marseille and Paul Sabatier - Toulouse III and Gustave Roussy, has resolved structures of two complexes involved in radiation-induced DNA damages. These results were published in Nature Structural & Molecular Biology on October, the 5th. DNA ; Structural biology ; Molecular mechanisms SB2SM Press release Mon, 08 Oct 2018 10:00:00 GMT What is the relationship between variants of the BRCA1 gene and susceptibility to cancer? https://www.cea.fr/drf/joliot/en/Pages/news/Science/2018/relationship-variants-BRCA1-cancer.aspx Research Teams from the Curie Institute, the Gustave Roussy Institute, as well as the biophysics teams from the Institute of Chemistry of Natural Substances and SB2SM (I2BC@Saclay) met to systematically identify structural defects and BRCA1 proteins encoded by variants of the BRCA1 gene, a gene predisposing to breast and ovarian cancer. Their results make it possible to propose a classification of these variants (neutral versus causal). Cancer ; Structural biology ; DNA Scientific result Fri, 28 Sep 2018 10:00:00 GMT Protein modification: myristoylation finally decoded https://www.cea.fr/drf/joliot/en/Pages/news/Science/2018/myristoylation-decoded.aspx An I2BC Research Team, in collaboration with the ICSN and the Ecole Polytechnique, has mapped for the first time, in man and the model plant Arabidopsis thaliana, the myristoylome, namely the whole proteins modified with a fatty acid, myristate. This modification is important because it targets these proteins to the membranes and thus contributes to their subcellular compartmentalization. These data represent an important resource, available to the community of biologists. Structural biology News Tue, 26 Jun 2018 10:00:00 GMT The ghosts of fluorescence https://www.cea.fr/drf/joliot/en/Pages/news/Science/2018/ghosts-of-fluorescence.aspx Cell biology uses fluorescent labeling, an essential technique to follow the life of the cell. But fluorescent proteins have their limits, which researchers from IBS and I2BC @ Saclay (SB2SM) are trying to repel. Structural biology ; Proteomics Scientific result Wed, 28 Mar 2018 10:00:00 GMT An original biotechnological approach to create new bioactive molecules https://www.cea.fr/drf/joliot/en/Pages/news/Science/2018/biotechnological-approach-new-bioactive-molecules.aspx ​Muriel Gondry's Research Team (I2BC@Saclay / SBIGeM), in collaboration with SIMOPRO and Biomolecules Laboratory of the Sorbonne University's one, produced 200 cyclodipeptides containing non-natural amino acids by luring and diverting the cellular machinery for the synthesis of proteins. This unprecedented approach significantly increases the diversity of these bioactive molecules. Biotechnology ; Structural biology Scientific result Mon, 05 Mar 2018 11:00:00 GMT New MOOC on biological crystallography https://www.cea.fr/drf/joliot/en/Pages/news/Institute/2017/New_MOOC_on_biological_crystallography.aspx Paris-Saclay University is pleased to present the MOOC "Journey to the heart of life with X-rays: crystallography", result of a close collaboration between the Department I2BC @ Saclay (pedagogical director: Marie-Hélène Le Du ), the Sun Synchrotron, the Ecole Polytechnique, the CNRS, and the University Paris Sud. Institutional ; Health & life sciences ; Structural biology News Mon, 18 Sep 2017 10:00:00 GMT The catalytic mechanism of cyclodipeptide synthases finally elucidated! https://www.cea.fr/drf/joliot/en/Pages/ARCHIVES/IBITECS_anglais/News/2015/cyclodipeptide_synthases_elucidated-.aspx Teams of IBITECS and Ecole Polytechnique (Palaiseau) have deciphered the mechanism used by the cyclodipeptide synthases (CDPS) to catalyze the formation of peptide bonds. Structural biology ; Cellular mechanisms News Fri, 01 May 2015 10:00:00 GMT Lynch Syndrome: structural biology in the service of diagnostic support https://www.cea.fr/drf/joliot/en/Pages/ARCHIVES/IBITECS_anglais/News/2013/Lynch-Syndrome-structural-biology-in-the-service-of-diagnostic-support.aspx Researchers at the CEA, CNRS and Université Paris-Sud have presented the first model of the architecture of the MLH1 protein associated with Lynch syndrome, a genetic predisposition to colorectal cancer. This atomic level “image” of MLH1 will lead to better understanding of the genetic processes that cause the disease. Structural biology ; Cancer IBITECS Scientific result Mon, 25 Feb 2013 11:00:00 GMT